CDS

Accession Number TCMCG043C38574
gbkey CDS
Protein Id XP_022879981.1
Location complement(join(19986647..19986799,19987051..19987166,19987609..19987632,19987710..19987741,19988234..19988319,19988410..19988463,19989045..19989106,19989209..19989270,19989480..19989566,19989662..19989738,19993960..19994018,19994121..19994185,19994271..19994360,19994468..19994564,19994860..19994959,19995053..19995126,19995590..19995671,19995763..19995813,19995923..19996000,19997339..19997383,19997488..19997589,19998427..19998483,19998935..19999021,19999290..19999347,19999420..19999451,19999559..19999586,19999655..19999756,19999897..20000051,20001264..20001327,20002000..20002072,20002148..20002228,20002490..20002584,20002708..20002739,20003598..20003633))
Gene LOC111397344
GeneID 111397344
Organism Olea europaea var. sylvestris

Protein

Length 831aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA417827
db_source XM_023024213.1
Definition DNA mismatch repair protein MSH5 isoform X1 [Olea europaea var. sylvestris]

EGGNOG-MAPPER Annotation

COG_category L
Description MutS domain III
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08741        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000710        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010777        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043073        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051026        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGAAATCGGCGAAATGGAAGCCGTTCCTCAGGTCTATATGGCTTGTGTCATGCAGGGTCGAAGAATCGGTGTCTCTTATTTTGATTCCAGTATTTGTCAACTCCACGTGCTGGAATTTTGGGAAGATGGCAGTGAAGATTTTCAGTTGATTGATATGGTAAAATATCAAGCCAAGCCCTTCACAATCTATACCAGCACTAAGAGTGAAGAATCCTTCTTGGCTGCTTTACAAAGAAGTGATGGGACCAGTGAAGCACCAACTGTAAAGCTCGTGAAAAGTTCATTATTTAGCTATGAGCAAGCATGGCACAGATTAACGTACCTTCGAGTAACAGGAATGGATGATGGGTTAAATATCAAAGAAAGGATCTCTTTTCTTAGTTCTATGATGGACGTCCGAAGTGATGTTCAAGTCCGTGCAAGTGGCGGACTTCTTGCCATTTTAGAGAATGAGAAGATAGTAGATACCATGGAACAGCAGGAATTTGGGGCTGCATCAATCATGATTGACTCATTCACTGAAATTTCACTAAACAATTTTCTCAAAGTCGATTCAGCTGCCCATGAGGCGTTGCAAATATTCCAAATTGACAAACATCCAAGCCATATGGGAATTGGAAGATCCAAGGAAGGGTTCTCTGTATATGGAATGATGAATAAGTGTGTTACACCAATGGGGAGACGCCTCCTGAGGAACTGGTTCCTGAGGCCTATACTGAACCTTGATAAGTTGAATGGTCGTCTTGATACTATATCATTCTTTCTTTCTGCTGAAGAATTGTTGGCTTCTTTGCGTGACACATTAAAGTCTGTGAAAGACATTCCCCACATACTTAAGAAAATCAACTCTCCGAGTTCTGTGTGTAGGAGTGGTGACTGGTCAGCTTTTCTCAAGAGCATTTGTTCACTGCTGCATATCAACAAGATATTTGAAGTAGGCATTTCCGTAACTCTTCGAGAACAACTTGCATATTTAAACTTGGATGTAGTTGAGAAGGCTGGTATTTACTTCTCCACGGATCTGGCATATGTCTATAATCTGGTAATTGGTGTTATTGATGTTAATCGAAGTAAAGACAAGGATTATGAGACACTAGTAAAAGATGGTTTCTGTGGCGAGTTGGATGAGCTGAGGCAAATATACGAGGAGTTGCCTGAATTTTTGGAAGAGGTGTCATCATTGGAACTTGCAAGGCTTCCTCATACATCCAGAGAAAAATTCATTCCTTGTATTGTTTATATACACCAGATAGGATACTTAATGTGCATTTTTGAAGAAAAACTTGACGAACAAATTCTAGAGAAACTTCAAGATTTTGAATTTTCTTTTTCAGACGGGGATGGAGATTCTAAGAAGTTTTTCTACCGCACTGCAAAGACACGGGAACTTGATGACCTTTTAGGAGATATATATCATAAAATTTTGGACATGGAGAGAGCAATTACAAGAGACCTTGCCAAGCACATACTTCAATTCTCAGCACCTATACTCAAAGCTGTTAATTTTGCAGCTGAGCTTGATTGTTCTTTGTCATTAGCTTTTGTTGCTCGTCAGAACAATTATGTGAGGCCTATTTTGACCACAGAAAGCATGCTCGATATTAGAAACGGAAGGCATATTTTACAGGAAATGACGGTAGATGTGTTTATTCCAAATGATACAAAGATTCTGGATGAAGGACAGATCAAGATCATCACTGGCCCTAACTATTCTGGGAAAAGTATCTACATAAAGCAGGTTGCATTGATTGTTTTTCTTTCCCACATTGGAAGTTTTGTACCAGCTGATGCAGCTACTGTGGGTTTGACTGATAGGATATTTTGTGCAATGGGAAGCAAATTTATGACTGCTGAACAATCAACATTTATGATTGATCTCCACCAAGTGGGTACGATGTTGAGGCATGCAAGCTCTCATTCTTTATGTTTATTGGATGAATTTGGAAAAGGAACTCTTTCTGAAGATGGTATTGGTCTCCTTGGTGGAGCTATAAATTATTTTGCCTCGAGAAATAATCCTCCAAAGGTTCTCATTTGTACTCACTTGAATGAGATACTTGACAACAACTATTTACTCGAGTCTGAAAAAATCAAGTATTACACCATGAGTGTGCTAAGCCCAGGTGATAAATCTACAGATGTTGAAGACATCACATTTTTGTATAGGTTGGTTCCTGGACGTACGCATCTTAGCTATGGTCTGCATTGTGCACTACTTTCTGGAGTTCCAGAGGAAGTAATAAAGAGAGCAGCATGTGTACTAGAGGCTACTGGTAACAAGAAGAATATAGAGCGAGTTTGCAGTGAAGACATATCTGCTCAAGATCAGCTATACAAGGCAGCTGTGGAGAAGATGTTAGCTTTTGATACTTCAAATGGTGATCTGGGTCATTTCTTTGAAGATATCTTTCCTTCTCACCATGACGAGGATGAAAATCCCTTTAATTCTCTCAGCCTGTCACAGGGAATGGGGTTGTGTAACCGTAGATGA
Protein:  
MEEIGEMEAVPQVYMACVMQGRRIGVSYFDSSICQLHVLEFWEDGSEDFQLIDMVKYQAKPFTIYTSTKSEESFLAALQRSDGTSEAPTVKLVKSSLFSYEQAWHRLTYLRVTGMDDGLNIKERISFLSSMMDVRSDVQVRASGGLLAILENEKIVDTMEQQEFGAASIMIDSFTEISLNNFLKVDSAAHEALQIFQIDKHPSHMGIGRSKEGFSVYGMMNKCVTPMGRRLLRNWFLRPILNLDKLNGRLDTISFFLSAEELLASLRDTLKSVKDIPHILKKINSPSSVCRSGDWSAFLKSICSLLHINKIFEVGISVTLREQLAYLNLDVVEKAGIYFSTDLAYVYNLVIGVIDVNRSKDKDYETLVKDGFCGELDELRQIYEELPEFLEEVSSLELARLPHTSREKFIPCIVYIHQIGYLMCIFEEKLDEQILEKLQDFEFSFSDGDGDSKKFFYRTAKTRELDDLLGDIYHKILDMERAITRDLAKHILQFSAPILKAVNFAAELDCSLSLAFVARQNNYVRPILTTESMLDIRNGRHILQEMTVDVFIPNDTKILDEGQIKIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKFMTAEQSTFMIDLHQVGTMLRHASSHSLCLLDEFGKGTLSEDGIGLLGGAINYFASRNNPPKVLICTHLNEILDNNYLLESEKIKYYTMSVLSPGDKSTDVEDITFLYRLVPGRTHLSYGLHCALLSGVPEEVIKRAACVLEATGNKKNIERVCSEDISAQDQLYKAAVEKMLAFDTSNGDLGHFFEDIFPSHHDEDENPFNSLSLSQGMGLCNRR